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BMCBI
2010
205views more  BMCBI 2010»
13 years 10 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
ICDE
2010
IEEE
178views Database» more  ICDE 2010»
13 years 8 months ago
The Hybrid-Layer Index: A synergic approach to answering top-k queries in arbitrary subspaces
In this paper, we propose the Hybrid-Layer Index (simply, the HL-index) that is designed to answer top-k queries efficiently when the queries are expressed on any arbitrary subset ...
Jun-Seok Heo, Junghoo Cho, Kyu-Young Whang
ICTIR
2009
Springer
14 years 5 months ago
PageRank: Splitting Homogeneous Singular Linear Systems of Index One
Abstract. The PageRank algorithm is used today within web information retrieval to provide a content-neutral ranking metric over web pages. It employs power method iterations to so...
Douglas V. de Jager, Jeremy T. Bradley
SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
14 years 2 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
EUROCAST
2007
Springer
122views Hardware» more  EUROCAST 2007»
14 years 2 months ago
Generation of Indexes for Compiling Efficient Parsers from Formal Specifications
abstract Parsing schemata [4] provide a formal, simple and uniform way to describe, analyze and compare different parsing algorithms. The notion of a parsing schema comes from cons...
Carlos Gómez-Rodríguez, Miguel A. Al...