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BIODATAMINING
2008
96views more  BIODATAMINING 2008»
13 years 9 months ago
Fast approximate hierarchical clustering using similarity heuristics
Background: Agglomerative hierarchical clustering (AHC) is a common unsupervised data analysis technique used in several biological applications. Standard AHC methods require that...
Meelis Kull, Jaak Vilo
BMCBI
2010
176views more  BMCBI 2010»
13 years 9 months ago
TargetSpy: a supervised machine learning approach for microRNA target prediction
Background: Virtually all currently available microRNA target site prediction algorithms require the presence of a (conserved) seed match to the 5' end of the microRNA. Recen...
Martin Sturm, Michael Hackenberg, David Langenberg...
BMCBI
2006
102views more  BMCBI 2006»
13 years 9 months ago
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
Background: The accuracy of protein secondary structure prediction has been improving steadily towards the 88% estimated theoretical limit. There are two types of prediction algor...
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
CP
2010
Springer
13 years 8 months ago
A Box-Consistency Contractor Based on Extremal Functions
Abstract. Interval-based methods can approximate all the real solutions of a system of equations and inequalities. The Box interval constraint propagation algorithm enforces Box co...
Gilles Trombettoni, Yves Papegay, Gilles Chabert, ...
TON
2010
99views more  TON 2010»
13 years 4 months ago
Rate Control With Pairwise Intersession Network Coding
In this paper, we develop a distributed rate-control algorithm for networks with multiple unicast sessions when network coding is allowed across different sessions. Building on rec...
Abdallah Khreishah, Chih-Chun Wang, Ness B. Shroff