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» Indexing and Retrieval for Genomic Databases
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APBC
2004
15 years 5 months ago
Variable-length Intervals in Homology Search
Fast, accurate, and scalable search techniques for homology searching of large genomic collections are becoming an increasingly important requirement as genomic sequence collectio...
Abhijit Chattaraj, Hugh E. Williams
NAR
2002
136views more  NAR 2002»
15 years 3 months ago
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
The Gene Expression Omnibus (GEO) project was initiated in response to the growing demand for a public repository for high-throughput gene expression data. GEO provides a flexible...
Ron Edgar, Michael Domrachev, Alex E. Lash
SIGMOD
2009
ACM
213views Database» more  SIGMOD 2009»
16 years 4 months ago
Dictionary-based order-preserving string compression for main memory column stores
Column-oriented database systems [19, 23] perform better than traditional row-oriented database systems on analytical workloads such as those found in decision support and busines...
Carsten Binnig, Stefan Hildenbrand, Franz Fär...
DKE
1998
88views more  DKE 1998»
15 years 4 months ago
Temporal Grid File: A File Structure for Interval Data
Disk I/O is a major bottleneck for query processing in database applications. This bottleneck is especially a problem for temporal databases because of their large size. Reduction...
Chiang Lee, Te-Ming Tseng
SIGMOD
2003
ACM
190views Database» more  SIGMOD 2003»
16 years 4 months ago
Hardware Acceleration for Spatial Selections and Joins
Spatial database operations are typically performed in two steps. In the filtering step, indexes and the minimum bounding rectangles (MBRs) of the objects are used to quickly dete...
Chengyu Sun, Divyakant Agrawal, Amr El Abbadi