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BMCBI
2006
125views more  BMCBI 2006»
13 years 7 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
BMCBI
2006
122views more  BMCBI 2006»
13 years 7 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2007
182views more  BMCBI 2007»
13 years 7 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
ENVSOFT
2007
54views more  ENVSOFT 2007»
13 years 7 months ago
Evaluation of landscape and instream modeling to predict watershed nutrient yields
The project goal was to loosely couple the SWAT model and the QUAL2E model and compare their combined ability to predict total phosphorus (TP) and NO3-N plus NO2-N yields to the a...
K. W. Migliaccio, I. Chaubey, B. E. Haggard
TASLP
2008
124views more  TASLP 2008»
13 years 7 months ago
Sparse Linear Regression With Structured Priors and Application to Denoising of Musical Audio
Abstract--We describe in this paper an audio denoising technique based on sparse linear regression with structured priors. The noisy signal is decomposed as a linear combination of...
Cédric Févotte, Bruno Torrésa...