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    » Inferring differentiation pathways from gene expression
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    GCB
    2010
    Springer
    204views Biometrics» more  GCB 2010»
    Learning Pathway-based Decision Rules to Classify Microarray Cancer Samples
    13 years 6 months ago
    Learning Pathway-based Decision Rules to Classify Microarray Cancer Samples
    Download  www.cs.nott.ac.uk
    : Despite recent advances in DNA chip technology current microarray gene expression studies are still affected by high noise levels, small sample sizes and large numbers of uninfor...
    Enrico Glaab, Jonathan M. Garibaldi, Natalio Krasn...
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    BMCBI
    2010
    106views more  BMCBI 2010»
    A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
    13 years 8 months ago
    A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
    Download  www.biomedcentral.com
    Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
    Guofeng Meng, Axel Mosig, Martin Vingron
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    BIOCOMP
    2006
    233views Bioinformatics» more  BIOCOMP 2006»
    Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
    13 years 10 months ago
    Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
    Download  ww1.ucmss.com
    Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
    Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
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    ICIC
    2009
    Springer
    213views Applied Computing» more  ICIC 2009»
    Inference of Differential Equation Models by Multi Expression Programming for Gene Regulatory Networks
    13 years 6 months ago
    Inference of Differential Equation Models by Multi Expression Programming for Gene Regulatory Networks
    Download  cilab.ujn.edu.cn
    This paper presents an evolutionary method for identifying the gene regulatory network from the observed time series data of gene expression using a system of ordinary differential...
    Bin Yang, Yuehui Chen, Qingfang Meng
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    BMCBI
    2007
    114views more  BMCBI 2007»
    Large scale statistical inference of signaling pathways from RNAi and microarray data
    13 years 8 months ago
    Large scale statistical inference of signaling pathways from RNAi and microarray data
    Download  www.biomedcentral.com
    Background: The advent of RNA interference techniques enables the selective silencing of biologically interesting genes in an efficient way. In combination with DNA microarray tec...
    Holger Fröhlich, Mark Fellmann, Holger Sü...
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