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» Information extraction by finding repeated structure
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BMCBI
2008
125views more  BMCBI 2008»
13 years 7 months ago
Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors
Background: The Potato type II (Pot II) family of proteinase inhibitors plays critical roles in the defense system of plants from Solanaceae family against pests. To better unders...
Lesheng Kong, Shoba Ranganathan
SIGMOD
2009
ACM
140views Database» more  SIGMOD 2009»
14 years 2 months ago
Robust web extraction: an approach based on a probabilistic tree-edit model
On script-generated web sites, many documents share common HTML tree structure, allowing wrappers to effectively extract information of interest. Of course, the scripts and thus ...
Nilesh N. Dalvi, Philip Bohannon, Fei Sha
SIGSOFT
2006
ACM
14 years 1 months ago
Using task context to improve programmer productivity
When working on a large software system, a programmer typically spends an inordinate amount of time sifting through thousands of artifacts to find just the subset of information n...
Mik Kersten, Gail C. Murphy
BMCBI
2007
147views more  BMCBI 2007»
13 years 7 months ago
Comparative analysis of long DNA sequences by per element information content using different contexts
Background: Features of a DNA sequence can be found by compressing the sequence under a suitable model; good compression implies low information content. Good DNA compression mode...
Trevor I. Dix, David R. Powell, Lloyd Allison, Jul...
BMCBI
2010
103views more  BMCBI 2010»
13 years 7 months ago
Detecting internally symmetric protein structures
Background: Many functional proteins have a symmetric structure. Most of these are multimeric complexes, which are made of non-symmetric monomers arranged in a symmetric manner. H...
Changhoon Kim, Jodi Basner, Byungkook Lee