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» Informative sampling for large unbalanced data sets
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BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...
ALMOB
2006
106views more  ALMOB 2006»
13 years 7 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...
BMCBI
2010
154views more  BMCBI 2010»
13 years 5 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
SIGMOD
2011
ACM
202views Database» more  SIGMOD 2011»
12 years 10 months ago
Sensitivity analysis and explanations for robust query evaluation in probabilistic databases
Probabilistic database systems have successfully established themselves as a tool for managing uncertain data. However, much of the research in this area has focused on efficient...
Bhargav Kanagal, Jian Li, Amol Deshpande
IACR
2011
110views more  IACR 2011»
12 years 7 months ago
On the (In)security of Hash-based Oblivious RAM and a New Balancing Scheme
With the gaining popularity of remote storage (e.g. in the Cloud), we consider the setting where a small, protected local machine wishes to access data on a large, untrusted remot...
Eyal Kushilevitz, Steve Lu, Rafail Ostrovsky