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BMCBI
2006
139views more  BMCBI 2006»
13 years 9 months ago
Integrated functional visualization of eukaryotic genomes
Background: Increasing amounts of data from large scale whole genome analysis efforts demands convenient tools for manipulation, visualization and investigation. Whole genome plot...
Rohit Ghai, Hannes Lindemann, Trinad Chakraborty
BMCBI
2007
182views more  BMCBI 2007»
13 years 9 months ago
EDISA: extracting biclusters from multiple time-series of gene expression profiles
Background: Cells dynamically adapt their gene expression patterns in response to various stimuli. This response is orchestrated into a number of gene expression modules consistin...
Jochen Supper, Martin Strauch, Dierk Wanke, Klaus ...
IJCNN
2008
IEEE
14 years 3 months ago
Comparative study on normalization procedures for cluster analysis of gene expression datasets
—Normalization before clustering is often needed for proximity indices, such as Euclidian distance, which are sensitive to differences in the magnitude or scales of the attribute...
Marcílio Carlos Pereira de Souto, Daniel S....
NAR
2008
90views more  NAR 2008»
13 years 8 months ago
Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata
Many Microbe Microarrays Database (M3D ) is designed to facilitate the analysis and visualization of expression data in compendia compiled from multiple laboratories. M3D contains...
Jeremiah J. Faith, Michael E. Driscoll, Vincent A....
KDD
2004
ACM
314views Data Mining» more  KDD 2004»
14 years 9 months ago
Assessment of discretization techniques for relevant pattern discovery from gene expression data
In the domain of gene expression data analysis, various researchers have recently emphasized the promising application of pattern discovery techniques like association rule mining...
Ruggero G. Pensa, Claire Leschi, Jéré...