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» Integrating databases and workflow systems
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BMCBI
2005
117views more  BMCBI 2005»
13 years 8 months ago
An SVM-based system for predicting protein subnuclear localizations
Background: The large gap between the number of protein sequences in databases and the number of functionally characterized proteins calls for the development of a fast computatio...
Zhengdeng Lei, Yang Dai
SIGMOD
2009
ACM
161views Database» more  SIGMOD 2009»
14 years 8 months ago
Automated SQL tuning through trial and (sometimes) error
SQL tuning--the attempt to improve a poorly-performing execution plan produced by the database query optimizer-is a critical aspect of database performance tuning. Ironically, as ...
Herodotos Herodotou, Shivnath Babu
BMCBI
2006
140views more  BMCBI 2006»
13 years 8 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
EDBT
2008
ACM
124views Database» more  EDBT 2008»
14 years 8 months ago
Multi-dimensional search for personal information management systems
With the explosion in the amount of semi-structured data users access and store in personal information management systems, there is a need for complex search tools to retrieve of...
Amélie Marian, Christopher Peery, Thu D. Ng...
BMCBI
2007
142views more  BMCBI 2007»
13 years 8 months ago
LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics
nd: A key abstraction in representing proteomics knowledge is the notion of unique identifiers for individual entities (e.g. proteins) and the massive graph of relationships among...
Andrew K. Smith, Kei-Hoi Cheung, Kevin Y. Yip, Mar...