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NAR
2006
170views more  NAR 2006»
13 years 7 months ago
The UCSC Genome Browser Database: update 2006
The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major m...
Angela S. Hinrichs, Donna Karolchik, Robert Baerts...
CIKM
2008
Springer
13 years 9 months ago
Passage relevance models for genomics search
We present a passage relevance model for integrating syntactic and semantic evidence of biomedical concepts and topics using a probabilistic graphical model. Component models of t...
Jay Urbain, Ophir Frieder, Nazli Goharian
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 10 months ago
MIPS: curated databases and comprehensive secondary data resources in 2010
The Munich Information Center for Protein Sequences (MIPS at the Helmholtz Center for Environmental Health, Neuherberg, Germany) has many years of experience in providing annotate...
Hans-Werner Mewes, Andreas Ruepp, Fabian J. Theis,...
SEMWEB
2009
Springer
14 years 2 months ago
What Four Million Mappings Can Tell You about Two Hundred Ontologies
The field of biomedicine has embraced the Semantic Web probably more than any other field. As a result, there is a large number of biomedical ontologies covering overlapping area...
Amir Ghazvinian, Natalya Fridman Noy, Clement Jonq...
BIBM
2008
IEEE
107views Bioinformatics» more  BIBM 2008»
14 years 1 months ago
A Functional Network of Yeast Genes Using Gene Ontology Information
In the post-genomic era, the organization of genes into networks has played an important role in characterizing the functions of individual genes and the interplay between them. I...
Erliang Zeng, Giri Narasimhan, Lisa Schneper, Kala...