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CORR
2011
Springer
358views Education» more  CORR 2011»
13 years 2 months ago
Time-Varying Graphs and Social Network Analysis: Temporal Indicators and Metrics
Abstract. Most instruments - formalisms, concepts, and metrics for social networks analysis fail to capture their dynamics. Typical systems exhibit different scales of dynamics, ra...
Nicola Santoro, Walter Quattrociocchi, Paola Flocc...
BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
13 years 7 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
BMCBI
2007
113views more  BMCBI 2007»
13 years 7 months ago
Hinge Atlas: relating protein sequence to sites of structural flexibility
Background: Relating features of protein sequences to structural hinges is important for identifying domain boundaries, understanding structure-function relationships, and designi...
Samuel Flores, Long J. Lu, Julie Yang, Nicholas Ca...
WWW
2006
ACM
14 years 8 months ago
Visualizing tags over time
We consider the problem of visualizing the evolution of tags within the Flickr (flickr.com) online image sharing community. Any user of the Flickr service may append a tag to any ...
Micah Dubinko, Ravi Kumar, Joseph Magnani, Jasmine...
BMCBI
2010
98views more  BMCBI 2010»
13 years 7 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...