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BMCBI
2010
132views more  BMCBI 2010»
13 years 7 months ago
Next generation tools for genomic data generation, distribution, and visualization
Background: With the rapidly falling cost and availability of high throughput sequencing and microarray technologies, the bottleneck for effectively using genomic analysis in the ...
David A. Nix, Tonya L. Di Sera, Brian K. Dalley, B...
JVM
2004
165views Education» more  JVM 2004»
13 years 8 months ago
Using Hardware Performance Monitors to Understand the Behavior of Java Applications
Modern Java programs, such as middleware and application servers, include many complex software components. Improving the performance of these Java applications requires a better ...
Peter F. Sweeney, Matthias Hauswirth, Brendon Caho...
BMCBI
2008
133views more  BMCBI 2008»
13 years 7 months ago
SPIKE - a database, visualization and analysis tool of cellular signaling pathways
Background: Biological signaling pathways that govern cellular physiology form an intricate web of tightly regulated interlocking processes. Data on these regulatory networks are ...
Ran Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky...
BMCBI
2005
115views more  BMCBI 2005»
13 years 7 months ago
SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design
Background: The determination of protein surfaces and the detection of binding sites are essential to our understanding of protein-protein interactions. Such binding sites can be ...
Andrean Goede, Ines S. Jaeger, Robert Preissner
NAR
2010
194views more  NAR 2010»
13 years 2 months ago
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Alternative splicing is an important mechanism for increasing protein diversity. However, its functional effects are largely unknown. Here, we present our new software workflow co...
Dorothea Emig, Nathan Salomonis, Jan Baumbach, Tho...