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    BMCBI
    2010
    81views more  BMCBI 2010»
    Discrete wavelet transform de-noising in eukaryotic gene splicing
    13 years 10 months ago
    Discrete wavelet transform de-noising in eukaryotic gene splicing
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    Background: This paper compares the most common digital signal processing methods of exon prediction in eukaryotes, and also proposes a technique for noise suppression in exon pre...
    Tina P. George, Tessamma Thomas
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    BMCBI
    2010
    118views more  BMCBI 2010»
    Computing H/D-Exchange rates of single residues from data of proteolytic fragments
    13 years 10 months ago
    Computing H/D-Exchange rates of single residues from data of proteolytic fragments
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    Background: Protein conformation and protein/protein interaction can be elucidated by solution-phase Hydrogen/ Deuterium exchange (sHDX) coupled to high-resolution mass analysis o...
    Ernst Althaus, Stefan Canzar, Carsten Ehrler, Mark...
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    BMCBI
    2008
    101views more  BMCBI 2008»
    Prediction of glycosylation sites using random forests
    13 years 10 months ago
    Prediction of glycosylation sites using random forests
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    Background: Post translational modifications (PTMs) occur in the vast majority of proteins and are essential for function. Prediction of the sequence location of PTMs enhances the...
    Stephen E. Hamby, Jonathan D. Hirst
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    BMCBI
    2007
    134views more  BMCBI 2007»
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
    13 years 10 months ago
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
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    Background: The availability of microarrays measuring thousands of genes simultaneously across hundreds of biological conditions represents an opportunity to understand both indiv...
    Curtis Huttenhower, Avi I. Flamholz, Jessica N. La...
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    BMCBI
    2008
    162views more  BMCBI 2008»
    Background correction using dinucleotide affinities improves the performance of GCRMA
    13 years 10 months ago
    Background correction using dinucleotide affinities improves the performance of GCRMA
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    Background: High-density short oligonucleotide microarrays are a primary research tool for assessing global gene expression. Background noise on microarrays comprises a significan...
    Raad Z. Gharaibeh, Anthony Fodor, Cynthia Gibas
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