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BMCBI
2006
130views more  BMCBI 2006»
13 years 9 months ago
An interactive visualization tool to explore the biophysical properties of amino acids and their contribution to substitution ma
Background: Quantitative descriptions of amino acid similarity, expressed as probabilistic models of evolutionary interchangeability, are central to many mainstream bioinformatic ...
Blazej Bulka, Marie desJardins, Stephen J. Freelan...
BMCBI
2004
200views more  BMCBI 2004»
13 years 8 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
CMSB
2007
Springer
14 years 3 months ago
Context Sensitivity in Logical Modeling with Time Delays
For modeling and analyzing regulatory networks based on qualitative information and possibly additional temporal constraints, approaches using hybrid automata can be very helpful. ...
Heike Siebert, Alexander Bockmayr
ECAL
2005
Springer
14 years 2 months ago
Artificial Life Meets Anthropology: A Case of Aggression in Primitive Societies
One of the greatest challenges in the modern biological and social sciences has been to understand the evolution of altruistic and cooperative behaviors. General outlines of the an...
Mikhail S. Burtsev
EVOW
2004
Springer
14 years 2 months ago
Self-Adaptive Scouting - Autonomous Experimentation for Systems Biology
Abstract. We introduce a new algorithm for autonomous experimentation. This algorithm uses evolution to drive exploration during scientific discovery. Population size and mutation...
Naoki Matsumaru, Florian Centler, Klaus-Peter Zaun...