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NAR
2011
223views Computer Vision» more  NAR 2011»
12 years 10 months ago
ODB: a database for operon organizations, 2011 update
ODB (Operon DataBase) aims to collect data of all known and conserved operons in completely sequenced genomes. Three newly updated features of this database have been added as fol...
Shujiro Okuda, Akiyasu C. Yoshizawa
BMCBI
2010
156views more  BMCBI 2010»
13 years 7 months ago
PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci
Background: Functional genomic studies involving high-throughput sequencing and tiling array applications, such as ChIP-seq and ChIP-chip, generate large numbers of experimentally...
Mali Salmon-Divon, Heidi Dvinge, Kairi Tammoja, Pa...
AVI
2006
13 years 9 months ago
Line graph explorer: scalable display of line graphs using Focus+Context
Scientific measurements are often depicted as line graphs. Stateof-the-art high throughput systems in life sciences, telemetry and electronics measurement rapidly generate hundred...
Robert Kincaid, Heidi Lam
BIB
2010
129views more  BIB 2010»
13 years 7 months ago
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...
IVS
2008
121views more  IVS 2008»
13 years 7 months ago
Using treemaps for variable selection in spatio-temporal visualisation
We demonstrate and reflect upon the use of enhanced treemaps that incorporate spatial and temporal ordering for exploring a large multivariate spatio-temporal data set. The result...
Aidan Slingsby, Jason Dykes, Jo Wood