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BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
Multiple organism algorithm for finding ultraconserved elements
Background: Ultraconserved elements are nucleotide or protein sequences with 100% identity (no mismatches, insertions, or deletions) in the same organism or between two or more or...
Scott Christley, Neil F. Lobo, Gregory R. Madey
BMCBI
2006
130views more  BMCBI 2006»
13 years 7 months ago
MicroTar: predicting microRNA targets from RNA duplexes
Background: The accurate prediction of a comprehensive set of messenger RNAs (targets) regulated by animal microRNAs (miRNAs) remains an open problem. In particular, the predictio...
Rahul Thadani, Martti T. Tammi
BMCBI
2006
133views more  BMCBI 2006»
13 years 7 months ago
Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae
Background: Signal recognition and information processing is a fundamental cellular function, which in part involves comprehensive transcriptional regulatory (TR) mechanisms carri...
Illés J. Farkas, Chuang Wu, Chakra Chennubh...
ECCC
2007
122views more  ECCC 2007»
13 years 7 months ago
Infeasibility of Instance Compression and Succinct PCPs for NP
The OR-SAT problem asks, given Boolean formulae φ1, . . . , φm each of size at most n, whether at least one of the φi’s is satisfiable. We show that there is no reduction fr...
Lance Fortnow, Rahul Santhanam
MICRO
2006
IEEE
94views Hardware» more  MICRO 2006»
13 years 7 months ago
A Sampling Method Focusing on Practicality
In the past few years, several research works have demonstrated that sampling can drastically speed up architecture simulation, and several of these sampling techniques are already...
Daniel Gracia Pérez, Hugues Berry, Olivier ...