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BMCBI
2010
117views more  BMCBI 2010»
13 years 8 months ago
Using jackknife to assess the quality of gene order phylogenies
Background: In recent years, gene order data has attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. If ge...
Jian Shi, Yiwei Zhang, Haiwei Luo, Jijun Tang
NAR
2000
182views more  NAR 2000»
13 years 8 months ago
tmRDB (tmRNA database)
Maintained at the University of Texas Health Science Center at Tyler, Texas, the tmRNA database (tmRDB) is accessible at the URL http://psyche.uthct.edu/dbs/ tmRDB/tmRDB.html with...
Christian Zwieb, Jacek Wower
BMCBI
2006
155views more  BMCBI 2006»
13 years 8 months ago
Analysis of promoter regions of co-expressed genes identified by microarray analysis
Background: The use of global gene expression profiling to identify sets of genes with similar expression patterns is rapidly becoming a widespread approach for understanding biol...
Srinivas Veerla, Mattias Höglund
PRIB
2009
Springer
100views Bioinformatics» more  PRIB 2009»
14 years 3 months ago
Evidence-Based Clustering of Reads and Taxonomic Analysis of Metagenomic Data
Abstract. The rapidly emerging field of metagenomics seeks to examine the genomic content of communities of organisms to understand their roles and interactions in an ecosystem. I...
Gianluigi Folino, Fabio Gori, Mike S. M. Jetten, E...
BIOINFORMATICS
2000
74views more  BIOINFORMATICS 2000»
13 years 8 months ago
Net Nearest Neighbor Analysis (NNNA) summarizes non-compensated dinucleotides within gene sequences
Motivation: Net Nearest Neighbor Analysis (NNNA) measures a previously unexamined aspect of dinucleotide frequency--the non-compensated, non-repetitive dinucleotides in a sequence...
Dorothy M. Lang