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SIGMOD
2008
ACM
103views Database» more  SIGMOD 2008»
14 years 7 months ago
XArch: archiving scientific and reference data
Database archiving is important for the retrieval of old versions of a database and for temporal queries over the history of data. We demonstrate XArch, a management system for ma...
Heiko Müller, Ioannis Koltsidas, Peter Bunema...
BMCBI
2008
116views more  BMCBI 2008»
13 years 7 months ago
Gene Ontology annotations: what they mean and where they come from
To address the challenges of information integration and retrieval, the computational genomics community increasingly has come to rely on the methodology of creating annotations o...
David P. Hill, Barry Smith, Monica S. McAndrews-Hi...
BMCBI
2010
167views more  BMCBI 2010»
13 years 7 months ago
BisoGenet: a new tool for gene network building, visualization and analysis
Background: The increasing availability and diversity of omics data in the post-genomic era offers new perspectives in most areas of biomedical research. Graph-based biological ne...
Alexander Martin, Maria Elena Ochagavia, Laya C. R...
OTM
2009
Springer
14 years 2 months ago
Ontology-Driven Provenance Management in eScience: An Application in Parasite Research
Provenance, from the French word “provenir”, describes the lineage or history of a data entity. Provenance is critical information in scientific applications to verify experime...
Satya Sanket Sahoo, D. Brent Weatherly, Raghava Mu...
BMCBI
2005
151views more  BMCBI 2005»
13 years 7 months ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...