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BMCBI
2007
168views more  BMCBI 2007»
13 years 10 months ago
GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Holger Fröhlich, Nora Speer, Annemarie Poustk...
BMCBI
2008
80views more  BMCBI 2008»
13 years 10 months ago
Towards an automatic classification of protein structural domains based on structural similarity
Background: Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual ste...
Vichetra Sam, Chin-Hsien Tai, Jean Garnier, Jean-F...
CERA
2010
105views more  CERA 2010»
13 years 10 months ago
Implications of Alternative Multilevel Design Methods for Design Process Management
Multilevel design problems are typically decomposed into a hierarchy of distributed and strongly coupled sub-problems, each solved by design teams with specialized knowledge and t...
David Shahan, Carolyn Seepersad Seepersad
ALGORITHMICA
2006
86views more  ALGORITHMICA 2006»
13 years 10 months ago
Slabpose Columnsort: A New Oblivious Algorithm for Out-of-Core Sorting on Distributed-Memory Clusters
Our goal is to develop a robust out-of-core sorting program for a distributed-memory cluster. The literature contains two dominant paradigms for out-of-core sorting algorithms: me...
Geeta Chaudhry, Thomas H. Cormen
BMCBI
2006
109views more  BMCBI 2006»
13 years 10 months ago
Integrated analysis of gene expression by association rules discovery
Background: Microarray technology is generating huge amounts of data about the expression level of thousands of genes, or even whole genomes, across different experimental conditi...
Pedro Carmona-Saez, Monica Chagoyen, Andrés...