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BMCBI
2010
125views more  BMCBI 2010»
13 years 8 months ago
NeatMap - non-clustering heat map alternatives in R
Background: The clustered heat map is the most popular means of visualizing genomic data. It compactly displays a large amount of data in an intuitive format that facilitates the ...
Satwik Rajaram, Yoshi Oono
BMCBI
2007
176views more  BMCBI 2007»
13 years 8 months ago
Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue
Background: Micro- and macroarray technologies help acquire thousands of gene expression patterns covering important biological processes during plant ontogeny. Particularly, fait...
Marc Strickert, Nese Sreenivasulu, Björn Usad...
ALMOB
2006
135views more  ALMOB 2006»
13 years 7 months ago
P-value based visualization of codon usage data
Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the prediction of gene expression levels. Both ...
Peter Meinicke, Thomas Brodag, Wolfgang Florian Fr...
CGF
2007
157views more  CGF 2007»
13 years 7 months ago
Mesh Segmentation via Spectral Embedding and Contour Analysis
We propose a mesh segmentation algorithm via recursive bisection where at each step, a sub-mesh embedded in 3D is first spectrally projected into the plane and then a contour is ...
Rong Liu, Hao Zhang 0002
JIIS
2006
113views more  JIIS 2006»
13 years 7 months ago
Spatial ordering and encoding for geographic data mining and visualization
: Geographic information (e.g., locations, networks, and nearest neighbors) are unique and different from other aspatial attributes (e.g., population, sales, or income). It is a ch...
Diansheng Guo, Mark Gahegan