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» Large Scale Matching for Position Weight Matrices
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BMCBI
2007
133views more  BMCBI 2007»
13 years 9 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
GIS
2010
ACM
13 years 8 months ago
Efficiently locating photographs in many panoramas
We present a method for efficient and reliable geo-positioning of images. It relies on image-based matching of the query images onto a trellis of existing images that provides acc...
Michael Kroepfl, Yonatan Wexler, Eyal Ofek
DAS
2010
Springer
14 years 1 months ago
Towards more effective distance functions for word image matching
Matching word images has many applications in document recognition and retrieval systems. Dynamic Time Warping (DTW) is popularly used to estimate the similarity between word imag...
Raman Jain, C. V. Jawahar
KDD
2004
ACM
190views Data Mining» more  KDD 2004»
14 years 10 months ago
Kernel k-means: spectral clustering and normalized cuts
Kernel k-means and spectral clustering have both been used to identify clusters that are non-linearly separable in input space. Despite significant research, these methods have re...
Inderjit S. Dhillon, Yuqiang Guan, Brian Kulis
BMCBI
2008
125views more  BMCBI 2008»
13 years 9 months ago
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions
Background: Due to recent progress in genome sequencing, more and more data for phylogenetic reconstruction based on rearrangement distances between genomes become available. Howe...
Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohl...