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BICOB
2010
Springer
14 years 13 days ago
Folding-aware and Structure-conscious 3D Substructures in Folding Data: Identification and Applications
Molecular dynamics simulations have been employed by biologists to study the protein folding problem. Such simulations have resulted in a large number of protein folding trajector...
Hui Yang, Saurabh Gupte, Runtang Wang, Rahul Parte
CODES
2003
IEEE
14 years 28 days ago
A multiobjective optimization model for exploring multiprocessor mappings of process networks
In the Sesame framework, we develop a modeling and simulation environment for the efficient design space exploration of heterogeneous embedded systems. Since Sesame recognizes se...
Cagkan Erbas, Selin C. Erbas, Andy D. Pimentel
ATMOS
2007
177views Optimization» more  ATMOS 2007»
13 years 9 months ago
Approximate dynamic programming for rail operations
Abstract. Approximate dynamic programming offers a new modeling and algorithmic strategy for complex problems such as rail operations. Problems in rail operations are often modeled...
Warren B. Powell, Belgacem Bouzaïene-Ayari
TVCG
2012
205views Hardware» more  TVCG 2012»
11 years 10 months ago
A Deformable Surface Model for Real-Time Water Drop Animation
—A water drop behaves differently from a large water body because of its strong viscosity and surface tension under the small scale. Surface tension causes the motion of a water ...
Yizhong Zhang, Huamin Wang, Shuai Wang, Yiying Ton...
JPDC
2007
167views more  JPDC 2007»
13 years 7 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...