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» Large scale sequencing by hybridization
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FOCS
1995
IEEE
13 years 11 months ago
Reconstructing Strings from Substrings in Rounds
We establish a variety of combinatorial bounds on the tradeo s inherent in reconstructing strings using few rounds of a given number of substring queries per round. These results ...
Dimitris Margaritis, Steven Skiena
IJCAI
2007
13 years 9 months ago
A Hybridized Planner for Stochastic Domains
Markov Decision Processes are a powerful framework for planning under uncertainty, but current algorithms have difficulties scaling to large problems. We present a novel probabil...
Mausam, Piergiorgio Bertoli, Daniel S. Weld
BMCBI
2007
126views more  BMCBI 2007»
13 years 7 months ago
High-throughput identification of interacting protein-protein binding sites
Background: With the advent of increasing sequence and structural data, a number of methods have been proposed to locate putative protein binding sites from protein surfaces. Ther...
Jo-Lan Chung, Wei Wang, Philip E. Bourne
ICDM
2003
IEEE
101views Data Mining» more  ICDM 2003»
14 years 23 days ago
Interactive Visualization and Navigation in Large Data Collections using the Hyperbolic Space
We propose the combination of two recently introduced methods for the interactive visual data mining of large collections of data. Both, Hyperbolic Multi-Dimensional Scaling (HMDS...
Jörg A. Walter, Jörg Ontrup, Daniel Wess...
BMCBI
2010
141views more  BMCBI 2010»
13 years 7 months ago
Genome scale prediction of substrate specificity for acyl adenylate superfamily of enzymes based on active site residue profiles
Background: Enzymes belonging to acyl:CoA synthetase (ACS) superfamily activate wide variety of substrates and play major role in increasing the structural and functional diversit...
Pankaj Khurana, Rajesh S. Gokhale, Debasisa Mohant...