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BMCBI
2008
116views more  BMCBI 2008»
13 years 8 months ago
Clustering exact matches of pairwise sequence alignments by weighted linear regression
Background: At intermediate stages of genome assembly projects, when a number of contigs have been generated and their validity needs to be verified, it is desirable to align thes...
Alvaro J. González, Li Liao
IJCAI
2007
13 years 9 months ago
MB-DPOP: A New Memory-Bounded Algorithm for Distributed Optimization
In distributed combinatorial optimization problems, dynamic programming algorithms like DPOP ([Petcu and Faltings, 2005]) require only a linear number of messages, thus generating...
Adrian Petcu, Boi Faltings
CODES
2004
IEEE
13 years 11 months ago
Dynamic overlay of scratchpad memory for energy minimization
The memory subsystem accounts for a significant portion of the aggregate energy budget of contemporary embedded systems. Moreover, there exists a large potential for optimizing th...
Manish Verma, Lars Wehmeyer, Peter Marwedel
LATIN
1998
Springer
14 years 3 days ago
Fast Two-Dimensional Approximate Pattern Matching
We address the problem of approximate string matching in two dimensions, that is, to nd a pattern of size m m in a text of size n n with at most k errors (substitutions, insertions...
Ricardo A. Baeza-Yates, Gonzalo Navarro
EVOW
2005
Springer
14 years 1 months ago
Convergence Synthesis of Dynamic Frequency Modulation Tones Using an Evolution Strategy
This paper reports on steps that have been taken to enhance previously presented evolutionary sound matching work. In doing so, the convergence characteristics are shown to provide...
Thomas J. Mitchell, Anthony G. Pipe