54 search results - page 5 / 11 » Linear Time Algorithm for Parsing RNA Secondary Structure |
ISSPIT
2010
13 years 2 months ago
2010
Graphics processing units (GPU) on commodity video cards have evolved into powerful computational devices. The RNA secondary structure arises from the primary structure and a backb...
ICASSP
2007
IEEE
14 years 1 months ago
2007
IEEE
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
BMCBI
2006
13 years 7 months ago
2006
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
IJBRA
2006
13 years 7 months ago
2006
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...
WABI
2007
Springer
14 years 1 months ago
2007
Springer
Predicting the secondary structure of an RNA sequence is an important problem in structural bioinformatics. The general RNA folding problem, where the sequence to be folded may con...