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BMCBI
2006
155views more  BMCBI 2006»
13 years 6 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
CLEF
2006
Springer
13 years 10 months ago
UB at GeoCLEF 2006
This paper summarizes the work done at the State University of New York at Buffalo (UB) in the GeoCLEF 2006 track. The approach presented uses pure IR techniques (indexing of sing...
Miguel E. Ruiz, June M. Abbas, David Mark, Stuart ...
BMCBI
2005
125views more  BMCBI 2005»
13 years 6 months ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
ACL
2008
13 years 8 months ago
A Critical Reassessment of Evaluation Baselines for Speech Summarization
We assess the current state of the art in speech summarization, by comparing a typical summarizer on two different domains: lecture data and the SWITCHBOARD corpus. Our results ca...
Gerald Penn, Xiaodan Zhu
BMCBI
2002
129views more  BMCBI 2002»
13 years 6 months ago
SeqHound: biological sequence and structure database as a platform for bioinformatics research
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
Katerina Michalickova, Gary D. Bader, Michel Dumon...