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» Linking Databases and Linking Cultures
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BMCBI
2008
104views more  BMCBI 2008»
13 years 9 months ago
InteroPORC: an automated tool to predict highly conserved protein interaction networks
teps. First, we abstracted protein interactions onto orthologous cluster links. For a given source interaction, if both proteins belonged to a cluster, we constructed a link betwee...
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Pa...
PVLDB
2008
128views more  PVLDB 2008»
13 years 8 months ago
Implementing filesystems by tree-aware DBMSs
With the rise of XML, the database community has been challenged by semi-structured data processing. Since the data type behind XML is the tree, state-of-the-art RDBMSs have learn...
Alexander Holupirek, Marc H. Scholl
APCCM
2008
13 years 10 months ago
Constraint Acquisition - You Can Chase but You Cannot Find
We identify established tableaux techniques as an invaluable tool for semantic knowledge acquisition in the design process of relational databases. Sample databases allow users an...
Sven Hartmann, Sebastian Link, Thu Trinh
BMCBI
2010
108views more  BMCBI 2010»
13 years 6 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
BMCBI
2007
81views more  BMCBI 2007»
13 years 9 months ago
PADB : Published Association Database
Background: Although molecular pathway information and the International HapMap Project data can help biomedical researchers to investigate the aetiology of complex diseases more ...
Hwanseok Rhee, Jin-Sung Lee