Background: Prediction of catalytic residues is a major step in characterizing the function of enzymes. In its simpler formulation, the problem can be cast into a binary classific...
PROFtmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative bacteria. For each query protein, PROFtmb provides both a Z-value indicating that the protein actually c...
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted seconda...
In this study, we propose a new machine learning model namely, Adaptive Locality-Effective Kernel Machine (Adaptive-LEKM) for protein phosphorylation site prediction. Adaptive-LEK...
Paul D. Yoo, Yung Shwen Ho, Bing Bing Zhou, Albert...