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» Logic-Based Modeling in Systems Biology
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SCAI
2008
15 years 5 months ago
Modeling Habituation in the Cnidarian Hydra
Abstract. In the design of behavior-based control architectures for robots it is common to use biology as inspiration, and often the observed functionalities of insect behaviors ar...
Malin Aktius, Mats Nordahl, Tom Ziemke
COMPLEX
2009
Springer
15 years 8 months ago
A Comparative Analysis of Specific Spatial Network Topological Models
Creating ensembles of random but "realistic" topologies for complex systems is crucial for many tasks such as benchmark generation and algorithm analysis. In general, exp...
Jun Wang, Gregory M. Provan
BMCBI
2010
126views more  BMCBI 2010»
15 years 4 months ago
Simulation of a Petri net-based Model of the Terpenoid Biosynthesis Pathway
Background: The development and simulation of dynamic models of terpenoid biosynthesis has yielded a systems perspective that provides new insights into how the structure of this ...
Aliah Hazmah Hawari, Zeti-Azura Mohamed-Hussein
ENTCS
2010
127views more  ENTCS 2010»
15 years 4 months ago
Combining Model Reductions
Molecular biological models usually suffer from a large combinatorial explosion. Indeed, proteins form complexes and modify each others, which leads to the formation of a huge num...
Ferdinanda Camporesi, Jérôme Feret, H...
CIBCB
2006
IEEE
15 years 10 months ago
A Stochastic model to estimate the time taken for Protein-Ligand Docking
Abstract— Quantum mechanics and molecular dynamic simulation provide important insights into structural configurations and molecular interaction data today. To extend this atomi...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...