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» Logical Hidden Markov Models
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BMCBI
2005
114views more  BMCBI 2005»
15 years 3 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
BMCBI
2010
87views more  BMCBI 2010»
15 years 3 months ago
Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model
Background: Epigenetics is an important layer of transcriptional control necessary for cell-type specific gene regulation. Recent studies have shown significant epigenetic pattern...
Jessica L. Larson, Guo-Cheng Yuan
137
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BMCBI
2007
94views more  BMCBI 2007»
15 years 3 months ago
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays
Background: Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlyi...
Philippe Lamy, Claus L. Andersen, Lars Dyrskjot, N...
166
Voted
BMCBI
2006
156views more  BMCBI 2006»
15 years 3 months ago
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
PR
2008
124views more  PR 2008»
15 years 3 months ago
A daily behavior enabled hidden Markov model for human behavior understanding
This paper presents a Hierarchical Context Hidden Markov Model (HC-HMM) for behavior understanding from video streams in a nursing center. The proposed HC-HMM infers elderly behav...
Pau-Choo Chung, Chin-De Liu