The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
Recently, multi-core architectures with alternative memory subsystem designs have emerged. Instead of using hardwaremanaged cache hierarchies, they employ software-managed embedde...
Abstract. Limited bandwidth to off-chip main memory is a performance bottleneck in chip multiprocessors for streaming computations, such as Cell/B.E., and this will become even mor...
We consider triply-nested loops of the type that occur in the standard Gaussian elimination algorithm, which we denote by GEP (or the Gaussian Elimination Paradigm). We present tw...
Dedicated operating systems for embedded systems are fast being phased out due to their use of manual optimization, which provides high performance and small footprint, but also r...