Sciweavers

194 search results - page 16 / 39
» MAP: Searching Large Genome Databases
Sort
View
BMCBI
2006
124views more  BMCBI 2006»
13 years 7 months ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet
EVOW
2010
Springer
14 years 2 months ago
Towards Automatic Detecting of Overlapping Genes - Clustered BLAST Analysis of Viral Genomes
Overlapping genes (encoded on the same DNA strand but in different frames) are thought to be rare and, therefore, were largely neglected in the past. In a test set of 800 viruses ...
Klaus Neuhaus, Daniela Oelke, David Fürst, Si...
BMCBI
2008
111views more  BMCBI 2008»
13 years 7 months ago
VisualRepbase: an interface for the study of occurrences of transposable element families
Background: Repbase is a reference database of eukaryotic repetitive DNA, which includes prototypic sequences of repeats and basic information described in annotations. Repbase al...
Sébastien Tempel, Matthew Jurka, Jerzy Jurk...
APBC
2004
13 years 9 months ago
Variable-length Intervals in Homology Search
Fast, accurate, and scalable search techniques for homology searching of large genomic collections are becoming an increasingly important requirement as genomic sequence collectio...
Abhijit Chattaraj, Hugh E. Williams
VLDB
1999
ACM
118views Database» more  VLDB 1999»
13 years 12 months ago
Similarity Search in High Dimensions via Hashing
The nearest- or near-neighbor query problems arise in a large variety of database applications, usually in the context of similarity searching. Of late, there has been increasing ...
Aristides Gionis, Piotr Indyk, Rajeev Motwani