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» MRA data segmentation using level sets
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BIOINFORMATICS
2007
66views more  BIOINFORMATICS 2007»
15 years 2 months ago
Gene expression network analysis and applications to immunology
We address the problem of using expression data and prior biological knowledge to identify differentially expressed pathways or groups of genes. Following an idea of Ideker et al...
Serban Nacu, Rebecca Critchley-Thorne, Peter Lee, ...
TJS
2002
135views more  TJS 2002»
15 years 2 months ago
HPCVIEW: A Tool for Top-down Analysis of Node Performance
Although it is increasingly difficult for large scientific programs to attain a significant fraction of peak performance on systems based on microprocessors with substantial instr...
John M. Mellor-Crummey, Robert J. Fowler, Gabriel ...
134
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ICFCA
2004
Springer
15 years 8 months ago
Automated Lattice Drawing
Lattice diagrams, known as Hasse diagrams, have played an ever increasing role in lattice theory and fields that use lattices as a tool. Initially regarded with suspicion, they no...
Ralph Freese
118
Voted
BMCBI
2007
147views more  BMCBI 2007»
15 years 2 months ago
Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Background: Cis-acting transcriptional regulatory elements in mammalian genomes typically contain specific combinations of binding sites for various transcription factors. Althoug...
Xochitl C. Morgan, Shulin Ni, Daniel P. Miranker, ...
175
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APVIS
2009
15 years 3 months ago
Visualization of signal transduction processes in the crowded environment of the cell
In this paper, we propose a stochastic simulation to model and analyze cellular signal transduction. The high number of objects in a simulation requires advanced visualization tec...
Martin Falk, Michael Klann, Matthias Reuss, Thomas...