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BMCBI
2010
102views more  BMCBI 2010»
13 years 8 months ago
Peptide binding predictions for HLA DR, DP and DQ molecules
Background: MHC class II binding predictions are widely used to identify epitope candidates in infectious agents, allergens, cancer and autoantigens. The vast majority of predicti...
Peng Wang, John Sidney, Yohan Kim, Alessandro Sett...
BMCBI
2007
145views more  BMCBI 2007»
13 years 8 months ago
Improved benchmarks for computational motif discovery
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
CORR
2007
Springer
104views Education» more  CORR 2007»
13 years 8 months ago
Sorting and Selection in Posets
Classical problems of sorting and searching assume an underlying linear ordering of the objects being compared. In this paper, we study a more general setting, in which some pairs...
Constantinos Daskalakis, Richard M. Karp, Elchanan...
SIAMCOMP
1998
102views more  SIAMCOMP 1998»
13 years 8 months ago
L-Printable Sets
A language is L-printable if there is a logspace algorithm which, on input 1n, prints all members in the language of length n. Following the work of Allender and Rubinstein [SIAM J...
Lance Fortnow, Judy Goldsmith, Matthew A. Levy, St...
CIKM
2010
Springer
13 years 7 months ago
Automatically suggesting topics for augmenting text documents
We present a method for automated topic suggestion. Given a plain-text input document, our algorithm produces a ranking of novel topics that could enrich the input document in a m...
Robert West, Doina Precup, Joelle Pineau