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BMCBI
2002
108views more  BMCBI 2002»
13 years 10 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
FCCM
2007
IEEE
111views VLSI» more  FCCM 2007»
14 years 5 months ago
A Structural Object Programming Model, Architecture, Chip and Tools for Reconfigurable Computing
A new platform for reconfigurable computing has an object-based programming model, with architecture, silicon and tools designed to faithfully realize this model. The platform is ...
Michael Butts, Anthony Mark Jones, Paul Wasson
FMICS
2008
Springer
14 years 15 days ago
Extending Structural Test Coverage Criteria for Lustre Programs with Multi-clock Operators
Lustre is a formal synchronous declarative language widely used for modeling and specifying safety-critical applications in the elds of avionics, transportation or energy productio...
Virginia Papailiopoulou, Laya Madani, Lydie du Bou...
CAV
2007
Springer
112views Hardware» more  CAV 2007»
14 years 5 months ago
Context-Bounded Analysis of Multithreaded Programs with Dynamic Linked Structures
Bounded context switch reachability analysis is a useful and efficient approach for detecting bugs in multithreaded programs. In this paper, we address the application of this app...
Ahmed Bouajjani, Séverine Fratani, Shaz Qad...
WCRE
2000
IEEE
14 years 3 months ago
A Structured Demonstration of Program Comprehension Tools
This paper describes a structured tool demonstration, a hybrid evaluation technique that combines elements from experiments, case studies, and technology demonstrations. Developer...
Susan Elliott Sim, Margaret-Anne D. Storey