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» Mapping Heterogeneous Distributed Applications on Clusters
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BMCBI
2007
128views more  BMCBI 2007»
13 years 9 months ago
Model order selection for bio-molecular data clustering
Background: Cluster analysis has been widely applied for investigating structure in bio-molecular data. A drawback of most clustering algorithms is that they cannot automatically ...
Alberto Bertoni, Giorgio Valentini
CLUSTER
2009
IEEE
14 years 4 months ago
Analyzing massive astrophysical datasets: Can Pig/Hadoop or a relational DBMS help?
Abstract— As the datasets used to fuel modern scientific discovery grow increasingly large, they become increasingly difficult to manage using conventional software. Parallel d...
Sarah Loebman, Dylan Nunley, YongChul Kwon, Bill H...
PDCAT
2009
Springer
14 years 4 months ago
CheCUDA: A Checkpoint/Restart Tool for CUDA Applications
Abstract—In this paper, a tool named CheCUDA is designed to checkpoint CUDA applications that use GPUs as accelerators. As existing checkpoint/restart implementations do not supp...
Hiroyuki Takizawa, Katsuto Sato, Kazuhiko Komatsu,...
CCGRID
2010
IEEE
13 years 7 months ago
Dynamic Load-Balanced Multicast for Data-Intensive Applications on Clouds
Data-intensive parallel applications on clouds need to deploy large data sets from the cloud's storage facility to all compute nodes as fast as possible. Many multicast algori...
Tatsuhiro Chiba, Mathijs den Burger, Thilo Kielman...
BMCBI
2008
160views more  BMCBI 2008»
13 years 9 months ago
Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi