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» Mapping sequences by parts
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BMCBI
2004
119views more  BMCBI 2004»
13 years 10 months ago
Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains : a web-ba
Background: Polymorphic tandem repeat typing is a new generic technology which has been proved to be very efficient for bacterial pathogens such as B. anthracis, M. tuberculosis, ...
France Denoeud, Gilles Vergnaud
KCAP
2003
ACM
14 years 4 months ago
Aiding knowledge capture by searching for extensions of knowledge models
Electronic concept mapping tools empower experts to play an active role in the knowledge capture process, and provide a medium for building richly connected multimedia knowledge m...
David B. Leake, Ana Gabriela Maguitman, Thomas Rei...
GIS
2008
ACM
14 years 12 months ago
The multi-rule partial sequenced route query
Trip planning search (TPS) represents an important class of queries in Geographic Information Systems (GIS). In many real-world applications, TPS requests are issued with a number...
Haiquan Chen, Wei-Shinn Ku, Min-Te Sun, Roger Zimm...
BMCBI
2008
149views more  BMCBI 2008»
13 years 11 months ago
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
ALMOB
2006
106views more  ALMOB 2006»
13 years 11 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...