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BMCBI
2008
165views more  BMCBI 2008»
13 years 7 months ago
Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics
Background: Mass spectrometry is a key technique in proteomics and can be used to analyze complex samples quickly. One key problem with the mass spectrometric analysis of peptides...
Wiebke Timm, Alexandra Scherbart, Sebastian Bö...
BMCBI
2010
109views more  BMCBI 2010»
13 years 7 months ago
Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
Background: In the last decade, biochemical studies have revealed that epigenetic modifications including histone modifications, histone variants and DNA methylation form a comple...
Xiaojiang Xu, Stephen Hoang, Marty W. Mayo, Stefan...
BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
Difference-based clustering of short time-course microarray data with replicates
Background: There are some limitations associated with conventional clustering methods for short time-course gene expression data. The current algorithms require prior domain know...
Jihoon Kim, Ju Han Kim
CORR
2010
Springer
190views Education» more  CORR 2010»
13 years 7 months ago
Overlap properties of geometric expanders
The overlap number of a finite (d + 1)-uniform hypergraph H is the largest constant c(H) (0, 1] such that no matter how we map the vertices of H into Rd , there is a point covered...
Jacob Fox, Mikhail Gromov, Vincent Lafforgue, Assa...
CORR
2010
Springer
144views Education» more  CORR 2010»
13 years 7 months ago
Algorithmic Verification of Single-Pass List Processing Programs
We introduce streaming data string transducers that map input data strings to output data strings in a single left-to-right pass in linear time. Data strings are (unbounded) seque...
Rajeev Alur, Pavol Cerný