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IM
2008
13 years 9 months ago
Directed Random Dot Product Graphs
In this paper we consider three models for random graphs that utilize the inner product as their fundamental object. We analyze the behavior of these models with respect to cluster...
Stephen J. Young, Edward R. Scheinerman
MCS
2008
Springer
13 years 9 months ago
Error analysis of a stochastic immersed boundary method incorporating thermal fluctuations
A stochastic numerical scheme for an extended immersed boundary method which incorporates thermal fluctuations for the simulation of microscopic biological systems consisting of fl...
Paul J. Atzberger, Peter R. Kramer
SIAMSC
2008
149views more  SIAMSC 2008»
13 years 9 months ago
Adaptive Discrete Galerkin Methods Applied to the Chemical Master Equation
In systems biology, the stochastic description of biochemical reaction kinetics is increasingly being employed to model gene regulatory networks and signalling pathways. Mathematic...
Peter Deuflhard, Wilhelm Huisinga, T. Jahnke, Mich...
BC
2005
127views more  BC 2005»
13 years 9 months ago
Computational modeling and exploration of contour integration for visual saliency
Abstract Weproposeacomputationalmodelofcontourintegration for visual saliency. The model uses biologically plausible devices to simulate how the representations of elements aligned...
T. Nathan Mundhenk, Laurent Itti
BMCBI
2005
84views more  BMCBI 2005»
13 years 9 months ago
A method of precise mRNA/DNA homology-based gene structure prediction
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
Alexander G. Churbanov, Mark Pauley, Daniel Quest,...