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BMCBI
2005
246views more  BMCBI 2005»
13 years 8 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
14 years 8 months ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han
NAR
2007
81views more  NAR 2007»
13 years 8 months ago
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation
The Pseudogene.org database serves as a comprehensive repository for pseudogene sequence annotation. The definition of a pseudogene varies within the literature, resulting in sign...
John E. Karro, Yangpan Yan, Deyou Zheng, Zhaolei Z...
ICMCS
2005
IEEE
129views Multimedia» more  ICMCS 2005»
14 years 2 months ago
Video handover for retrieval in a ubiquitous environment using floor sensor data
A system for retrieving video captured in a ubiquitous environment is presented. Data from pressure-based floor sensors are obtained as a supplementary input together with video f...
Gamhewage C. de Silva, Toshihiko Yamasaki, Takayuk...
IWOCA
2010
Springer
219views Algorithms» more  IWOCA 2010»
13 years 3 months ago
Efficient Chaining of Seeds in Ordered Trees
We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent wi...
Julien Allali, Cedric Chauve, Pascal Ferraro, Anne...