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BMCBI
2011
13 years 14 days ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...
SC
1995
ACM
14 years 12 days ago
Multicast Virtual Topologies for Collective Communication in MPCs and ATM Clusters
This paper de nes and describes the properties of a multicast virtual topology, the M-array, and a resource-ecient variation, the REM-array. It is shown how several collective op...
Yih Huang, Chengchang Huang, Philip K. McKinley
CLUSTER
2009
IEEE
13 years 6 months ago
MITHRA: Multiple data independent tasks on a heterogeneous resource architecture
With the advent of high-performance COTS clusters, there is a need for a simple, scalable and faulttolerant parallel programming and execution paradigm. In this paper, we show that...
Reza Farivar, Abhishek Verma, Ellick Chan, Roy H. ...
PPOPP
2006
ACM
14 years 2 months ago
Fast and transparent recovery for continuous availability of cluster-based servers
Recently there has been renewed interest in building reliable servers that support continuous application operation. Besides maintaining system state consistent after a failure, o...
Rosalia Christodoulopoulou, Kaloian Manassiev, Ang...
ICCS
2009
Springer
14 years 3 months ago
A Scalable and Adaptable Solution Framework within Components of the Community Climate System Model
Abstract. A framework for a fully implicit solution method is implemented into (1) the High Order Methods Modeling Environment (HOMME), which is a spectral element dynamical core o...
Katherine J. Evans, Damian W. I. Rouson, Andrew G....