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CIKM
2006
Springer
14 years 1 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...
BMCBI
2007
148views more  BMCBI 2007»
13 years 10 months ago
BPhyOG: An interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes
Background: Overlapping genes (OGs) in bacterial genomes are pairs of adjacent genes of which the coding sequences overlap partly or entirely. With the rapid accumulation of seque...
Yingqin Luo, Cong Fu, Da-Yong Zhang, Kui Lin
QEST
2005
IEEE
14 years 3 months ago
iLTLChecker: A Probabilistic Model Checker for Multiple DTMCs
iLTL is a probabilistic temporal logic that can specify properties of multiple discrete time Markov chains (DTMCs). In this paper, we describe two related tools: MarkovEstimator a...
YoungMin Kwon, Gul A. Agha
SIAMSC
2010
125views more  SIAMSC 2010»
13 years 8 months ago
A Parallel Geometric Multigrid Method for Finite Elements on Octree Meshes
Abstract. In this article, we present a parallel geometric multigrid algorithm for solving elliptic partial differential equations (PDEs) on octree based conforming finite elemen...
Rahul S. Sampath, George Biros
IPPS
2005
IEEE
14 years 3 months ago
Reducing Power with Performance Constraints for Parallel Sparse Applications
Sparse and irregular computations constitute a large fraction of applications in the data-intensive scientific domain. While every effort is made to balance the computational wor...
Guangyu Chen, Konrad Malkowski, Mahmut T. Kandemir...