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LATIN
2004
Springer
14 years 2 days ago
Combinatorial Problems on Strings with Applications to Protein Folding
We consider the problem of protein folding in the HP model on the 3D square lattice. This problem is combinatorially equivalent to folding a string of 0’s and 1’s so that the s...
Alantha Newman, Matthias Ruhl
ICDM
2008
IEEE
120views Data Mining» more  ICDM 2008»
14 years 1 months ago
Parameter Tuning for Differential Mining of String Patterns
Constraint-based mining has been proven to be extremely useful for supporting actionable pattern discovery. However, useful conjunctions of constraints that support domain driven ...
Jérémy Besson, Christophe Rigotti, I...
GECCO
2009
Springer
116views Optimization» more  GECCO 2009»
13 years 10 months ago
String- and permutation-coded genetic algorithms for the static weapon-target assignment problem
In the Weapon-Target Assignment Problem, m enemy targets are inbound, each with a value Vj representing the damage it may do. The defense has n weapons, and the probability that w...
Bryant A. Julstrom
IJCAI
2003
13 years 8 months ago
Employing Trainable String Similarity Metrics for Information Integration
The problem of identifying approximately duplicate objects in databases is an essential step for the information integration process. Most existing approaches have relied on gener...
Mikhail Bilenko, Raymond J. Mooney
BMCBI
2007
124views more  BMCBI 2007»
13 years 6 months ago
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
Background: Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to...
Charles Bland, Teresa L. Ramsey, Fareedah Sabree, ...