Sciweavers

439 search results - page 62 / 88
» Maximum entropy methods for biological sequence modeling
Sort
View
BMCBI
2007
106views more  BMCBI 2007»
13 years 9 months ago
Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
Background: Serial Analysis of Gene Expression (SAGE) is a high-throughput method for inferring mRNA expression levels from the experimentally generated sequence based tags. Stand...
Michael A. Gilchrist, Hong Qin, Russell L. Zaretzk...
BMCBI
2005
108views more  BMCBI 2005»
13 years 9 months ago
A linear memory algorithm for Baum-Welch training
Background: Baum-Welch training is an expectation-maximisation algorithm for training the emission and transition probabilities of hidden Markov models in a fully automated way. I...
István Miklós, Irmtraud M. Meyer
RECOMB
2005
Springer
14 years 9 months ago
Very Low Power to Detect Asymmetric Divergence of Duplicated Genes
Abstract. Asymmetric functional divergence of paralogues is a key aspect of the traditional model of evolution following duplication. If one gene continues to perform the ancestral...
Cathal Seoighe, Konrad Scheffler
ISBI
2007
IEEE
14 years 3 months ago
A Variational Model for Level-set Based Cell Tracking in Time-lapse Fluorescence Microscopy Images
Quantifying the motion and deformation of large numbers of cells through image sequences obtained with fluorescence microscopy is a recurrent task in many biological studies. Aut...
Oleh Dzyubachyk, Wiro J. Niessen, Erik H. W. Meije...
IPPS
2009
IEEE
14 years 3 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...