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» Maximum entropy methods for biological sequence modeling
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BMCBI
2007
108views more  BMCBI 2007»
13 years 9 months ago
Design and implementation of a generalized laboratory data model
Background: Investigators in the biological sciences continue to exploit laboratory automation methods and have dramatically increased the rates at which they can generate data. I...
Michael C. Wendl, Scott Smith, Craig S. Pohl, Davi...
NIPS
2008
13 years 10 months ago
A spatially varying two-sample recombinant coalescent, with applications to HIV escape response
Statistical evolutionary models provide an important mechanism for describing and understanding the escape response of a viral population under a particular therapy. We present a ...
Alexander Braunstein, Zhi Wei, Shane T. Jensen, Jo...
ALMOB
2006
155views more  ALMOB 2006»
13 years 9 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
MICCAI
2007
Springer
14 years 10 months ago
A Bayesian 3D Volume Reconstruction for Confocal Micro-rotation Cell Imaging
Abstract. Recently, micro-rotation confocal microscopy has enabled the acquisition of a sequence of slices for a non-adherent living cells where the slices' positions are roug...
Alain Trouvé, Bernard Chalmond, Yong Yu
CIARP
2005
Springer
14 years 2 months ago
Development and Validation of an Algorithm for Cardiomyocyte Beating Frequency Determination
The Chagas disease or Tripanosomiasis Americana affects between 16 and 18 million people in endemic areas. This disease affects the beating rate of infected patients’ cardiomyocy...
Demian Wassermann, Marta Mejail