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» Maximum likelihood analysis of algorithms and data structure...
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JCB
2006
124views more  JCB 2006»
13 years 8 months ago
The Average Common Substring Approach to Phylogenomic Reconstruction
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
Igor Ulitsky, David Burstein, Tamir Tuller, Benny ...
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 8 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
BMCBI
2007
237views more  BMCBI 2007»
13 years 8 months ago
FLAME, a novel fuzzy clustering method for the analysis of DNA microarray data
Background: Data clustering analysis has been extensively applied to extract information from gene expression profiles obtained with DNA microarrays. To this aim, existing cluster...
Limin Fu, Enzo Medico
ICCV
2007
IEEE
14 years 10 months ago
Structure from Statistics - Unsupervised Activity Analysis using Suffix Trees
Models of activity structure for unconstrained environments are generally not available a priori. Recent representational approaches to this end are limited by their computational...
Raffay Hamid, Siddhartha Maddi, Aaron F. Bobick, I...
CIARP
2006
Springer
13 years 10 months ago
Robustness Analysis of the Neural Gas Learning Algorithm
The Neural Gas (NG) is a Vector Quantization technique where a set of prototypes self organize to represent the topology structure of the data. The learning algorithm of the Neural...
Carolina Saavedra, Sebastián Moreno, Rodrig...