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BMCBI
2007
143views more  BMCBI 2007»
13 years 8 months ago
Factor analysis for gene regulatory networks and transcription factor activity profiles
Background: Most existing algorithms for the inference of the structure of gene regulatory networks from gene expression data assume that the activity levels of transcription fact...
Iosifina Pournara, Lorenz Wernisch
SISAP
2009
IEEE
155views Data Mining» more  SISAP 2009»
14 years 2 months ago
Analyzing Metric Space Indexes: What For?
—It has been a long way since the beginnings of metric space searching, where people coming from algorithmics tried to apply their background to this new paradigm, obtaining vari...
Gonzalo Navarro
BMCBI
2006
170views more  BMCBI 2006»
13 years 8 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...
SIGMOD
2005
ACM
166views Database» more  SIGMOD 2005»
14 years 8 months ago
Substructure Similarity Search in Graph Databases
Advanced database systems face a great challenge raised by the emergence of massive, complex structural data in bioinformatics, chem-informatics, and many other applications. The ...
Xifeng Yan, Philip S. Yu, Jiawei Han
ICDE
2009
IEEE
148views Database» more  ICDE 2009»
14 years 9 months ago
Online Interval Skyline Queries on Time Series
In many applications, we need to analyze a large number of time series. Segments of time series demonstrating dominating advantages over others are often of particular interest. In...
Bin Jiang, Jian Pei