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RECOMB
2004
Springer
14 years 7 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
BMCBI
2008
158views more  BMCBI 2008»
13 years 7 months ago
LC-MSsim - a simulation software for liquid chromatography mass spectrometry data
Background: Mass Spectrometry coupled to Liquid Chromatography (LC-MS) is commonly used to analyze the protein content of biological samples in large scale studies. The data resul...
Ole Schulz-Trieglaff, Nico Pfeifer, Clemens Gr&oum...
BMCBI
2005
84views more  BMCBI 2005»
13 years 7 months ago
A method of precise mRNA/DNA homology-based gene structure prediction
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
Alexander G. Churbanov, Mark Pauley, Daniel Quest,...
EDBT
2009
ACM
149views Database» more  EDBT 2009»
13 years 5 months ago
Towards integrated and efficient scientific sensor data processing: a database approach
In this work, we focus on managing scientific environmental data, which are measurement readings collected from wireless sensors. In environmental science applications, raw sensor...
Ji Wu, Yongluan Zhou, Karl Aberer, Kian-Lee Tan
ICDE
2007
IEEE
173views Database» more  ICDE 2007»
14 years 8 months ago
Annotating Structured Data of the Deep Web
An increasing number of databases have become Web accessible through HTML form-based search interfaces. The data units returned from the underlying database are usually encoded in...
Yiyao Lu, Hai He, Hongkun Zhao, Weiyi Meng, Clemen...