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» Measuring independence of datasets
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BMCBI
2006
171views more  BMCBI 2006»
15 years 4 months ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....
BMCBI
2007
126views more  BMCBI 2007»
15 years 4 months ago
Including probe-level uncertainty in model-based gene expression clustering
Background: Clustering is an important analysis performed on microarray gene expression data since it groups genes which have similar expression patterns and enables the explorati...
Xuejun Liu, Kevin K. Lin, Bogi Andersen, Magnus Ra...
ICDM
2009
IEEE
130views Data Mining» more  ICDM 2009»
15 years 2 months ago
Efficient Anonymizations with Enhanced Utility
The k-anonymization method is a commonly used privacy-preserving technique. Previous studies used various measures of utility that aim at enhancing the correlation between the orig...
Jacob Goldberger, Tamir Tassa
BMCBI
2006
200views more  BMCBI 2006»
15 years 4 months ago
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data
Background: Numerous feature selection methods have been applied to the identification of differentially expressed genes in microarray data. These include simple fold change, clas...
Ian B. Jeffery, Desmond G. Higgins, Aedín C...
BMCBI
2011
14 years 11 months ago
Meta-analysis of gene expression microarrays with missing replicates
Background: Many different microarray experiments are publicly available today. It is natural to ask whether different experiments for the same phenotypic conditions can be combin...
Fan Shi, Gad Abraham, Christopher Leckie, Izhak Ha...