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BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
FGCS
2007
160views more  FGCS 2007»
13 years 7 months ago
Distributed data mining in grid computing environments
The computing-intensive data mining for inherently Internet-wide distributed data, referred to as Distributed Data Mining (DDM), calls for the support of a powerful Grid with an e...
Ping Luo, Kevin Lü, Zhongzhi Shi, Qing He
SIGIR
2006
ACM
14 years 1 months ago
Mining dependency relations for query expansion in passage retrieval
Classical query expansion techniques such as the local context analysis (LCA) make use of term co-occurrence statistics to incorporate additional contextual terms for enhancing pa...
Renxu Sun, Chai-Huat Ong, Tat-Seng Chua
CLEF
2008
Springer
13 years 9 months ago
Back to Basics - Again - for Domain-Specific Retrieval
In this paper we will describe Berkeley's approach to the Domain Specific (DS) track for CLEF 2008. Last year we used Entry Vocabulary Indexes and Thesaurus expansion approac...
Ray R. Larson
BMCBI
2008
117views more  BMCBI 2008»
13 years 7 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...